Detailed information of matrix profile PH0138.1

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Profile summary
Name: Pitx2
Matrix ID: PH0138.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P97474  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 24 39 46 29 11 1 95 0 1 90 70 9 26 38 28 19 ]
C [ 23 8 13 17 10 0 0 5 1 1 0 4 16 32 13 17 43 ]
G [ 26 41 22 27 56 89 98 0 0 0 0 19 9 11 25 21 10 ]
T [ 27 27 26 10 5 0 1 0 99 98 10 7 65 31 24 34 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0138.1 PH0138 1 Pitx2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: