Detailed information of matrix profile PH0136.1

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Profile summary
Name: Phox2b
Matrix ID: PH0136.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O35690  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 16 22 24 39 5 2 97 98 1 0 94 78 2 15 30 13 7 ]
C [ 50 30 29 23 15 4 1 0 1 2 0 1 20 9 31 36 28 ]
G [ 17 28 9 32 1 0 2 1 0 1 4 15 20 15 22 20 38 ]
T [ 16 21 38 6 78 94 0 1 98 97 2 5 58 60 17 31 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0136.1 PH0136 1 Phox2b Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: