Detailed information of matrix profile PH0136.1

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Profile summary
Name: Phox2b
Matrix ID: PH0136.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O35690  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 27 31 17 60 58 5 2 97 98 1 0 94 78 6 38 21 16 ]
C [ 38 20 22 15 20 15 4 1 0 1 2 0 1 32 9 28 17 ]
G [ 28 36 31 9 20 1 0 2 1 0 1 4 15 23 29 30 50 ]
T [ 7 13 30 15 2 78 94 0 1 98 97 2 5 39 24 22 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0136.1 PH0136 1 Phox2b Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: