Detailed information of matrix profile PH0127.1

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Profile summary
Name: Nobox
Matrix ID: PH0127.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70367  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 31 24 35 30 2 2 92 96 3 1 65 38 10 23 16 13 ]
C [ 25 17 16 16 39 58 33 1 0 1 7 0 3 36 25 54 20 ]
G [ 41 29 16 19 16 3 0 7 1 0 1 33 58 23 28 18 50 ]
T [ 15 23 44 30 14 38 65 1 3 96 92 2 2 31 23 13 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0127.1 PH0127 1 Nobox Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: