Detailed information of matrix profile PH0127.1

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Profile summary
Name: Nobox
Matrix ID: PH0127.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70367  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 13 23 31 2 2 92 96 3 1 65 38 14 30 44 23 15 ]
C [ 50 18 28 23 58 33 1 0 1 7 0 3 16 19 16 29 41 ]
G [ 20 54 25 36 3 0 7 1 0 1 33 58 39 16 16 17 25 ]
T [ 13 16 23 10 38 65 1 3 96 92 2 2 30 35 24 31 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0127.1 PH0127 1 Nobox Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: