Detailed information of matrix profile PH0124.1

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Profile summary
Name: Obox5_1
Matrix ID: PH0124.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q7TPZ5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 41 33 81 36 17 2 99 99 1 1 0 1 8 17 29 39 ]
C [ 14 12 18 3 8 2 0 0 0 0 98 91 81 38 33 33 14 ]
G [ 38 19 31 8 18 0 0 0 0 0 0 0 6 14 23 4 19 ]
T [ 29 27 18 7 38 80 97 1 0 99 1 9 11 39 27 34 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0124.1 PH0124 1 Obox5_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: