Detailed information of matrix profile PH0124.1

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Profile summary
Name: Obox5_1
Matrix ID: PH0124.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q7TPZ5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 34 27 39 11 9 1 99 0 1 97 80 38 7 18 27 29 ]
C [ 19 4 23 14 6 0 0 0 0 0 0 0 18 8 31 19 38 ]
G [ 14 33 33 38 81 91 98 0 0 0 0 2 8 3 18 12 14 ]
T [ 39 29 17 8 1 0 1 1 99 99 2 17 36 81 33 41 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0124.1 PH0124 1 Obox5_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: