Detailed information of matrix profile PH0116.1

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Profile summary
Name: Nkx2-9
Matrix ID: PH0116.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O70584  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 15 23 32 67 87 1 0 77 1 3 2 41 79 59 24 15 ]
C [ 8 20 15 10 0 1 3 22 0 96 9 31 17 2 12 12 36 ]
G [ 16 12 7 24 31 9 96 0 22 3 1 0 25 5 10 21 13 ]
T [ 51 53 54 34 2 3 1 77 0 1 87 67 16 13 18 43 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0116.1 PH0116 1 Nkx2-9 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: