Detailed information of matrix profile PH0113.1

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Profile summary
Name: Nkx2-4
Matrix ID: PH0113.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9EQM3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 56 54 28 4 9 2 77 99 0 13 17 2 17 19 19 36 ]
C [ 5 5 4 15 3 53 0 0 0 0 0 13 40 13 19 16 ]
G [ 25 19 16 38 0 18 22 0 97 1 82 76 17 5 12 21 ]
T [ 14 23 51 43 89 28 1 0 2 85 1 9 25 63 50 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0113.1 PH0113 1 Nkx2-4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: