Detailed information of matrix profile PH0113.1

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Profile summary
Name: Nkx2-4
Matrix ID: PH0113.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9EQM3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 50 63 25 9 1 85 2 0 1 28 89 43 51 23 14 ]
C [ 21 12 5 17 76 82 1 97 0 22 18 0 38 16 19 25 ]
G [ 16 19 13 40 13 0 0 0 0 0 53 3 15 4 5 5 ]
T [ 36 19 19 17 2 17 13 0 99 77 2 9 4 28 54 56 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0113.1 PH0113 1 Nkx2-4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: