Detailed information of matrix profile PH0097.1

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Profile summary
Name: Lhx6_2
Matrix ID: PH0097.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9R1R0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 31 24 33 4 1 81 99 0 0 84 21 7 16 22 29 15 ]
C [ 7 50 32 24 72 15 1 0 1 18 0 3 67 12 18 12 22 ]
G [ 6 10 21 32 3 0 18 1 0 1 15 72 10 52 39 22 30 ]
T [ 56 8 24 11 21 84 0 0 99 81 1 4 15 20 21 37 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0097.1 PH0097 1 Lhx6_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: