Detailed information of matrix profile PH0096.1

  1. Home
  2. Matrix > PH0096.1

Profile summary
Name: Lhx6_1
Matrix ID: PH0096.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9R1R0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 16 40 28 24 31 6 1 83 98 0 0 88 47 11 22 6 52 ]
C [ 31 12 19 56 11 46 12 1 0 1 16 0 2 13 11 28 10 ]
G [ 38 15 34 9 53 2 0 16 1 0 1 12 46 27 41 22 6 ]
T [ 15 33 18 12 6 47 88 0 0 98 83 1 6 50 26 44 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0096.1 PH0096 1 Lhx6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: