Detailed information of matrix profile PH0077.1

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Profile summary
Name: Hoxd12
Matrix ID: PH0077.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P23812  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 40 37 26 11 0 2 12 0 92 98 98 58 19 19 27 22 ]
C [ 35 20 19 26 7 2 97 0 0 0 0 0 15 21 37 20 14 ]
G [ 11 15 23 38 83 0 0 88 0 0 0 0 3 10 18 18 25 ]
T [ 35 25 21 10 0 98 1 0 99 7 1 1 25 50 26 35 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0077.1 PH0077 1 Hoxd12 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: