Detailed information of matrix profile PH0073.1

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Profile summary
Name: Hoxc9
Matrix ID: PH0073.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09633  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 21 37 20 14 3 29 89 2 29 98 95 24 21 33 18 ]
C [ 21 12 22 6 5 20 69 1 1 1 1 2 30 27 9 20 ]
G [ 34 38 24 59 80 1 1 10 0 0 1 1 5 9 26 25 ]
T [ 18 29 16 15 1 77 1 1 97 70 1 3 41 43 32 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0073.1 PH0073 1 Hoxc9 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: