Detailed information of matrix profile PH0072.1

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Profile summary
Name: Hoxc8
Matrix ID: PH0072.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09025  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 28 24 32 29 13 1 91 97 1 4 91 35 17 21 9 ]
C [ 22 19 10 10 17 7 8 5 1 0 0 0 33 37 10 16 ]
G [ 24 9 41 36 37 56 0 0 0 1 5 8 4 17 42 17 ]
T [ 32 44 25 23 17 24 91 4 1 97 91 1 28 29 28 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0072.1 PH0072 1 Hoxc8 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: