Detailed information of matrix profile PH0072.1

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Profile summary
Name: Hoxc8
Matrix ID: PH0072.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09025  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 59 28 29 28 1 91 97 1 4 91 24 17 23 25 44 32 ]
C [ 17 42 17 4 8 5 1 0 0 0 56 37 36 41 9 24 ]
G [ 16 10 37 33 0 0 0 1 5 8 7 17 10 10 19 22 ]
T [ 9 21 17 35 91 4 1 97 91 1 13 29 32 24 28 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0072.1 PH0072 1 Hoxc8 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: