Detailed information of matrix profile PH0068.1

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Profile summary
Name: Hoxc13
Matrix ID: PH0068.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P50207  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 36 42 11 3 0 2 39 0 90 96 98 65 30 16 33 ]
C [ 22 21 15 23 84 3 89 0 2 0 0 0 8 14 23 9 ]
G [ 13 16 15 37 13 0 0 60 0 0 0 0 5 9 16 24 ]
T [ 33 27 27 29 0 96 9 1 98 10 4 1 22 47 46 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0068.1 PH0068 1 Hoxc13 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: