Detailed information of matrix profile PH0068.1

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Profile summary
Name: Hoxc13
Matrix ID: PH0068.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P50207  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 34 46 47 22 1 4 10 98 1 9 96 0 29 27 27 33 ]
C [ 24 16 9 5 0 0 0 0 60 0 0 13 37 15 16 13 ]
G [ 9 23 14 8 0 0 0 2 0 89 3 84 23 15 21 22 ]
T [ 33 16 30 65 98 96 90 0 39 2 0 3 11 42 36 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0068.1 PH0068 1 Hoxc13 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: