Detailed information of matrix profile PH0065.1

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Profile summary
Name: Hoxc10
Matrix ID: PH0065.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P31257  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 39 43 34 8 0 2 30 0 85 99 98 50 22 21 14 ]
C [ 24 12 16 14 6 4 98 0 0 0 0 1 13 33 26 15 ]
G [ 13 24 18 29 86 0 0 70 0 0 0 0 15 15 29 30 ]
T [ 39 25 23 23 0 96 0 0 99 14 1 1 23 30 25 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0065.1 PH0065 1 Hoxc10 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: