Detailed information of matrix profile PH0047.1

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Profile summary
Name: Hoxa11
Matrix ID: PH0047.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P31311  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 39 24 27 22 1 1 16 99 0 1 98 0 20 17 19 40 ]
C [ 31 25 11 9 0 0 0 0 74 0 0 85 27 14 20 14 ]
G [ 15 22 40 9 1 0 0 0 0 97 2 5 10 15 12 21 ]
T [ 15 29 21 60 98 98 83 0 26 2 0 10 43 54 49 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0047.1 PH0047 1 Hoxa11 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: