Detailed information of matrix profile PB0178.1

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Profile summary
Name: Sox8_2
Matrix ID: PB0178.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04886  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 41 17 85 2 3 6 91 5 23 42 26 52 20 23 ]
C [ 17 50 4 3 2 81 2 12 9 19 34 20 29 28 ]
G [ 21 13 2 3 2 3 6 16 57 16 20 11 28 37 ]
T [ 21 20 9 92 93 10 1 67 11 23 20 16 24 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0178.1 PB0178 1 Sox8_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: