Detailed information of matrix profile PB0166.1

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Profile summary
Name: Sox12_2
Matrix ID: PB0166.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04890  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 38 35 32 14 66 5 89 4 88 86 79 9 30 65 35 20 ]
C [ 32 32 18 33 6 29 4 69 4 4 5 14 13 13 13 20 ]
G [ 21 22 21 21 15 54 4 9 2 7 4 71 49 11 22 10 ]
T [ 10 10 28 33 13 12 4 17 6 3 12 6 9 10 30 50 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0166.1 PB0166 1 Sox12_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: