Detailed information of matrix profile PB0166.1

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Profile summary
Name: Sox12_2
Matrix ID: PB0166.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04890  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 50 30 10 9 6 12 3 6 17 4 12 13 33 28 10 10 ]
C [ 10 22 11 49 71 4 7 2 9 4 54 15 21 21 22 21 ]
G [ 20 13 13 13 14 5 4 4 69 4 29 6 33 18 32 32 ]
T [ 20 35 65 30 9 79 86 88 4 89 5 66 14 32 35 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0166.1 PB0166 1 Sox12_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: