Detailed information of matrix profile PB0165.1

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Profile summary
Name: Sox11_2
Matrix ID: PB0165.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 45 38 82 94 1 2 17 8 11 38 23 25 35 35 ]
C [ 14 12 0 1 2 2 2 1 27 19 18 15 11 17 ]
G [ 20 26 14 4 2 1 79 1 10 14 27 46 30 20 ]
T [ 21 24 3 1 95 95 1 89 52 29 33 14 24 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0165.1 PB0165 1 Sox11_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: