Detailed information of matrix profile PB0165.1

  1. Home
  2. Matrix > PB0165.1

Profile summary
Name: Sox11_2
Matrix ID: PB0165.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 28 24 14 33 29 52 89 1 95 95 1 3 24 21 ]
C [ 20 30 46 27 14 10 1 79 1 2 4 14 26 20 ]
G [ 17 11 15 18 19 27 1 2 2 2 1 0 12 14 ]
T [ 35 35 25 23 38 11 8 17 2 1 94 82 38 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0165.1 PB0165 1 Sox11_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: