Detailed information of matrix profile PB0163.1

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Profile summary
Name: Six6_2
Matrix ID: PB0163.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9QZ28  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 27 14 11 3 80 5 90 1 92 2 44 9 33 19 24 15 ]
C [ 27 17 28 31 7 6 6 3 2 5 15 49 63 18 33 36 13 ]
G [ 21 20 31 47 49 13 1 4 4 1 4 3 12 35 16 13 23 ]
T [ 18 35 26 10 42 1 88 3 93 1 80 4 16 14 32 27 48 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0163.1 PB0163 1 Six6_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: