Detailed information of matrix profile PB0161.1

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Profile summary
Name: Rxra_2
Matrix ID: PB0161.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P28700  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 13 22 31 20 40 47 77 15 5 7 10 40 21 35 28 22 ]
C [ 10 52 16 51 6 6 6 4 6 10 32 7 24 16 36 18 ]
G [ 36 19 38 14 49 1 1 76 53 19 14 47 21 21 16 29 ]
T [ 40 8 14 16 5 46 16 6 36 64 44 5 34 29 20 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0161.1 PB0161 1 Rxra_2 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: