Detailed information of matrix profile PB0157.1

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Profile summary
Name: Rara_2
Matrix ID: PB0157.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P11416  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 37 30 19 3 9 90 8 8 3 17 45 18 17 29 16 ]
C [ 20 28 45 18 16 4 3 90 91 82 45 6 52 16 49 15 ]
G [ 30 22 16 24 0 85 3 0 1 10 36 47 15 24 9 24 ]
T [ 31 12 9 39 80 2 4 1 1 5 2 2 16 43 13 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0157.1 PB0157 1 Rara_2 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: