Detailed information of matrix profile PB0157.1

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Profile summary
Name: Rara_2
Matrix ID: PB0157.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P11416  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 45 13 43 16 2 2 5 1 1 4 2 80 39 9 12 31 ]
C [ 24 9 24 15 47 36 10 1 0 3 85 0 24 16 22 30 ]
G [ 15 49 16 52 6 45 82 91 90 3 4 16 18 45 28 20 ]
T [ 16 29 17 18 45 17 3 8 8 90 9 3 19 30 37 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0157.1 PB0157 1 Rara_2 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: