Detailed information of matrix profile PB0133.1

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Profile summary
Name: Hic1_2
Matrix ID: PB0133.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9R1Y5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 25 24 28 30 16 1 1 1 1 98 7 31 23 21 28 ]
C [ 30 31 21 22 7 11 1 1 1 86 1 59 30 38 44 36 ]
G [ 27 16 25 19 4 17 97 97 97 1 1 3 15 18 24 15 ]
T [ 27 28 30 30 59 56 2 1 1 13 1 31 24 21 11 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0133.1 PB0133 1 Hic1_2 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: