Detailed information of matrix profile PB0133.1

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Profile summary
Name: Hic1_2
Matrix ID: PB0133.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9R1Y5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 11 21 24 31 1 13 1 1 2 56 59 30 30 28 27 ]
C [ 15 24 18 15 3 1 1 97 97 97 17 4 19 25 16 27 ]
G [ 36 44 38 30 59 1 86 1 1 1 11 7 22 21 31 30 ]
T [ 28 21 23 31 7 98 1 1 1 1 16 30 28 24 25 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0133.1 PB0133 1 Hic1_2 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: