Detailed information of matrix profile PB0132.1

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Profile summary
Name: Hbp1_2
Matrix ID: PB0132.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8R316  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 23 12 28 10 76 16 93 89 6 13 13 9 41 39 25 34 ]
C [ 20 31 19 20 32 14 71 1 2 2 3 4 9 18 29 33 20 ]
G [ 23 36 12 26 28 5 3 1 4 2 79 72 72 36 14 15 15 ]
T [ 27 10 56 26 30 6 10 4 4 90 6 10 9 5 18 26 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0132.1 PB0132 1 Hbp1_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: