Detailed information of matrix profile PB0132.1

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Profile summary
Name: Hbp1_2
Matrix ID: PB0132.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8R316  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 26 18 5 9 10 6 90 4 4 10 6 30 26 56 10 27 ]
C [ 15 15 14 36 72 72 79 2 4 1 3 5 28 26 12 36 23 ]
G [ 20 33 29 18 9 4 3 2 2 1 71 14 32 20 19 31 20 ]
T [ 34 25 39 41 9 13 13 6 89 93 16 76 10 28 12 23 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0132.1 PB0132 1 Hbp1_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: