Detailed information of matrix profile PB0114.1

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Profile summary
Name: Egr1_2
Matrix ID: PB0114.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P08046  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 22 45 32 15 15 2 2 66 1 5 5 28 27 35 31 ]
C [ 27 32 9 6 9 78 95 81 32 95 18 81 30 19 37 28 ]
G [ 25 20 20 43 3 3 1 1 1 1 12 2 28 34 16 23 ]
T [ 23 27 26 20 73 4 2 17 2 2 65 12 14 21 12 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0114.1 PB0114 1 Egr1_2 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: