Detailed information of matrix profile PB0114.1

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Profile summary
Name: Egr1_2
Matrix ID: PB0114.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P08046  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 12 21 14 12 65 2 2 17 2 4 73 20 26 27 23 ]
C [ 23 16 34 28 2 12 1 1 1 1 3 3 43 20 20 25 ]
G [ 28 37 19 30 81 18 95 32 81 95 78 9 6 9 32 27 ]
T [ 31 35 27 28 5 5 1 66 2 2 15 15 32 45 22 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0114.1 PB0114 1 Egr1_2 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: