Detailed information of matrix profile PB0109.1

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Profile summary
Name: Bbx_2
Matrix ID: PB0109.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8VBW5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 14 19 31 33 17 6 11 5 4 80 81 7 31 30 31 8 40 ]
C [ 37 39 29 16 42 16 4 3 9 5 9 81 26 21 6 34 18 ]
G [ 21 13 23 23 27 14 69 18 5 10 3 4 26 27 15 27 23 ]
T [ 28 30 17 28 14 64 16 75 82 5 6 7 16 22 49 30 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0109.1 PB0109 1 Bbx_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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