Detailed information of matrix profile PB0109.1

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Profile summary
Name: Bbx_2
Matrix ID: PB0109.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8VBW5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 30 49 22 16 7 6 5 82 75 16 64 14 28 17 30 28 ]
C [ 23 27 15 27 26 4 3 10 5 18 69 14 27 23 23 13 21 ]
G [ 18 34 6 21 26 81 9 5 9 3 4 16 42 16 29 39 37 ]
T [ 40 8 31 30 31 7 81 80 4 5 11 6 17 33 31 19 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0109.1 PB0109 1 Bbx_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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