Detailed information of matrix profile PB0081.1

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Profile summary
Name: Tcf1_1
Matrix ID: PB0081.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q66JY7  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 21 9 24 45 14 7 3 97 97 2 5 59 57 34 32 32 ]
C [ 25 39 23 30 15 9 7 0 1 0 90 29 5 12 13 25 18 ]
G [ 23 16 19 13 31 67 1 0 0 1 4 4 20 21 30 21 30 ]
T [ 21 24 50 32 9 9 85 97 2 1 4 61 16 10 23 22 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0081.1 PB0081 1 Tcf1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: