Detailed information of matrix profile PB0081.1

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Profile summary
Name: Tcf1_1
Matrix ID: PB0081.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q66JY7  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 22 23 10 16 61 4 1 2 97 85 9 9 32 50 24 21 ]
C [ 30 21 30 21 20 4 4 1 0 0 1 67 31 13 19 16 23 ]
G [ 18 25 13 12 5 29 90 0 1 0 7 9 15 30 23 39 25 ]
T [ 32 32 34 57 59 5 2 97 97 3 7 14 45 24 9 21 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0081.1 PB0081 1 Tcf1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: