Detailed information of matrix profile PB0080.1

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Profile summary
Name: Tbp_1
Matrix ID: PB0080.1
Class: Beta-sheet
Family: TATA-binding
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P29037  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 22 12 29 38 27 65 8 77 23 91 34 67 47 37 20 35 ]
C [ 27 40 23 10 4 1 1 0 0 0 1 2 11 29 13 22 ]
G [ 22 12 12 11 2 1 0 0 0 1 1 4 10 10 22 23 ]
T [ 29 35 35 41 67 34 91 23 77 8 65 27 32 24 45 20 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0080.1 PB0080 1 Tbp_1 Mus musculus
TATA-binding Beta-sheet
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: