Detailed information of matrix profile PB0074.1

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Profile summary
Name: Sox8_1
Matrix ID: PB0074.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04886  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 24 24 51 19 15 38 95 1 2 15 11 9 25 25 21 32 48 ]
C [ 20 14 13 9 33 13 1 3 1 4 1 10 43 17 14 15 13 ]
G [ 28 28 14 13 19 4 1 0 1 81 1 6 8 15 30 16 15 ]
T [ 28 34 22 60 33 45 4 96 96 1 87 75 23 43 36 37 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0074.1 PB0074 1 Sox8_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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