Detailed information of matrix profile PB0073.1

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Profile summary
Name: Sox7_1
Matrix ID: PB0073.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P40646  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 36 31 15 38 39 44 36 79 96 0 98 99 6 50 31 42 34 19 24 29 22 49 ]
C [ 30 23 18 10 17 7 7 4 0 95 0 0 0 2 9 20 22 30 14 27 30 17 ]
G [ 12 17 24 28 13 21 37 9 0 1 0 1 0 24 53 16 19 17 13 12 23 8 ]
T [ 22 30 43 25 30 27 19 8 3 3 1 0 93 24 7 23 25 34 49 32 25 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0073.1 PB0073 1 Sox7_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: