Detailed information of matrix profile PB0070.1

  1. Home
  2. Matrix > PB0070.1

Profile summary
Name: Sox30_1
Matrix ID: PB0070.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8CGW4  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 37 33 29 16 72 96 0 98 98 7 16 33 46 39 19 18 ]
C [ 10 18 8 23 5 0 86 1 0 0 11 9 18 24 27 24 ]
G [ 32 16 29 44 20 0 1 0 2 1 47 51 15 15 18 17 ]
T [ 20 33 33 17 3 4 12 1 0 92 27 6 21 22 37 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0070.1 PB0070 1 Sox30_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: