Detailed information of matrix profile PB0066.1

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Profile summary
Name: Sox17_1
Matrix ID: PB0066.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q61473  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 38 31 48 77 72 2 95 97 2 18 39 69 42 27 39 ]
C [ 28 15 6 8 2 86 1 0 1 2 17 9 10 31 12 ]
G [ 18 18 24 8 2 4 1 1 1 8 35 8 6 12 18 ]
T [ 15 36 22 8 24 9 3 2 96 72 9 15 42 30 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0066.1 PB0066 1 Sox17_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: