Detailed information of matrix profile PB0066.1

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Profile summary
Name: Sox17_1
Matrix ID: PB0066.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q61473  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 30 42 15 9 72 96 2 3 9 24 8 22 36 15 ]
C [ 18 12 6 8 35 8 1 1 1 4 2 8 24 18 18 ]
G [ 12 31 10 9 17 2 1 0 1 86 2 8 6 15 28 ]
T [ 39 27 42 69 39 18 2 97 95 2 72 77 48 31 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0066.1 PB0066 1 Sox17_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: