Detailed information of matrix profile PB0063.1

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Profile summary
Name: Sox13_1
Matrix ID: PB0063.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04891  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 27 19 37 50 13 83 96 2 94 95 4 47 42 36 21 30 ]
C [ 12 24 14 11 9 2 1 90 1 1 3 2 9 10 20 16 ]
G [ 17 18 16 28 62 13 1 1 1 3 1 8 12 18 12 7 ]
T [ 44 40 33 11 16 3 2 7 4 1 93 44 38 36 47 46 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0063.1 PB0063 1 Sox13_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: