Detailed information of matrix profile PB0061.1

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Profile summary
Name: Sox11_1
Matrix ID: PB0061.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 35 20 35 48 28 86 98 1 99 99 69 19 35 54 20 29 39 ]
C [ 24 24 17 11 7 4 0 98 0 1 0 0 7 18 30 20 22 ]
G [ 14 28 21 17 48 8 0 1 0 0 0 80 57 19 21 18 15 ]
T [ 27 29 27 23 17 1 2 1 1 0 30 1 1 9 29 33 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0061.1 PB0061 1 Sox11_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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