Detailed information of matrix profile PB0061.1

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Profile summary
Name: Sox11_1
Matrix ID: PB0061.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q04889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 33 29 9 1 1 30 0 1 1 2 1 17 23 27 29 27 ]
C [ 15 18 21 19 57 80 0 0 0 1 0 8 48 17 21 28 14 ]
G [ 22 20 30 18 7 0 0 1 0 98 0 4 7 11 17 24 24 ]
T [ 39 29 20 54 35 19 69 99 99 1 98 86 28 48 35 20 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0061.1 PB0061 1 Sox11_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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