Detailed information of matrix profile PB0053.1

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Profile summary
Name: Rara_1
Matrix ID: PB0053.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P11416  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 22 28 11 24 85 81 91 0 0 0 0 96 18 18 23 22 ]
C [ 18 36 27 41 5 1 1 0 0 0 98 0 52 38 23 17 ]
G [ 27 12 23 15 4 17 9 99 90 1 1 3 8 31 22 37 ]
T [ 33 25 39 20 6 1 0 1 10 99 2 0 22 12 32 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0053.1 PB0053 1 Rara_1 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: