Detailed information of matrix profile MA1367.1

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Profile summary
Name: AT1G76870
Matrix ID: MA1367.1
Class: Helix-Turn-Helix
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 209 218 173 87 287 436 418 448 6 0 175 41 177 229 ]
C [ 94 64 127 173 21 5 0 6 450 452 4 150 71 46 ]
G [ 53 59 65 73 3 5 2 0 0 0 257 222 53 35 ]
T [ 100 115 91 123 145 10 36 2 0 4 20 43 155 146 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1367.1 MA1367 1 AT1G76870 Arabidopsis thaliana
Trihelix Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: